Hypoxanthine (Deaminated Adenine) 3.1. Purines and pyrimidines may be synthesized de novo or recycled by a salvage pathway from normal catabolism. Unlike purine synthesis, pyrimidines are synthesized as bases and latter it is added to ribose sugar, i.e., the ring is completed before being it … Overproduction of pyrimidines is harm- less as their catabolites are easily excreted Deficient production of pyrimidines can cause clinical abnormalities 44. 2. Orotic aciduria: defect in UMP synthesis pathway. 2. . Inhibited by negative feedback from purine nucleotides and analogues likes: 6-Mercaptopurine and Azathioprine (which releases 6-Mercaptopurine). If you continue browsing the site, you agree to the use of cookies on this website. Cytosine 2. PRPP Purine nucleotides Pyrimidine nucleotides Denovo and Salvage pathways β AlanineUric acid Degradative pathways 2. L. Hubert, V.R. Pure As Gold i.e. Learn vocabulary, terms, and more with flashcards, games, and other study tools. Despite a diet that may be rich in nucleoproteins, dietary purines and pyrimidines are not incorporated directly into tissue nucleic acids. Slideshare uses cookies to improve functionality and performance, and to provide you with relevant advertising. Substrates: CO2; glutamine; ATP; Aspartate; H2O; NAD+; Phosphoribosyl pyrophosphate (PRPP). 12.15 Conclusions. First look for 2 rings. Purine and pyrimidine metabolism in cultured white. See our Privacy Policy and User Agreement for details. Disorders of pyrimidine metabolism are rare Moreover, they are less severe as compared to disorders of purine metabolism Disorders of pyrimidine metabolism 43. Nucleotide Metabolism • de novo Pyrimidine Biosynthesis Summary Pyrimidine Ring Synthesis Occurs First and Then it is Attached to Ribose ATCase is a Major Regulator and Balance of Pyrimidine/Purine Nucleotides ATP Activates, Favors Pyrimidines. Glucose-6-Phosphate (in Von-Gierke’s disease or Glucose 6-Phosphatase deficiency): Glucose 6-Phosphate accumulates which undergoes HMP shunt to generate excessive ribose-5-phosphate, the precursor of purines. A=U or T. Guanine (G) pairs via 3 hydrogen bonds to Cytosine (C), i.e. 2. Purine base contains adenine, guanine and hypoxanthine. Classic galactosemia) accumulation leads to ATP depletion and Pi sequestration in sugar. spruce (Picea glauca) cells: Metabolic fate of 14 C-labeled pre-cursors and activity of key enzymes. Purine Metabolism Disorders Purines are key components of cellular energy systems (eg, ATP, NAD), signaling (eg, GTP, cAMP, cGMP), and, along with pyrimidines, RNA and DNA production. Metabolism of Purine and Pyrimidine and disorders Dr. Ashok Kumar J International Medical School Malaysia 16/23/2014 Dr. Ashok Kumar J: IMS;MSU 2. De novo pyrimidine synthesis occurs in the cytosol of cells in all tissues. PRPP + Nitrogen base = Mono-nucleotide (OMP for pyrimidine and IMP for purine), Nitrogen base for pyrimidine = Orotic acid (Glutamine and aspartate), Orotate phosphoribosyl transferase (Phosphate and sugar added to nitrogen base), Nitrogen base for purine = Glutamine and Glycine, Phosphoribosyl amidotransferase (Nitrogen base added to phosphate and sugar). Humans synthesize the nucleic acids and their derivatives ATP, NAD +, coenzyme A, etc, from amphibolic intermediates.However, injected purine or pyrimidine analogs, including potential anticancer drugs, may nevertheless be incorporated into DNA. metabolism of purine nucleotides Slideshare uses cookies to improve functionality and performance, and to provide you with relevant advertising. Purine and Pyrimidine Biosynthesis Course no. • Identify the high-energy ribose donor in both purine and pyrimidine biosynthesis, and show how it is used in nucleotide slavage (see Chapter 17).. Which of the following is a purine base? Pyrimidine nucleotide biosynthesis takes place in a different manner from that of purine nucleotides. DHFR converting DHF to THF is inhibited by Methotrexate (eukaryocytes) and Trimethoprim (prokaryotes). Guanine 3. Products: UTP; CTP; glutamate; NADH; CO2 Lesch-Nyhan syndrome presents with: Spastic cerebral palsy (basal ganglia involvement), mental retardation, self-mutilation of hands and lips, hyperuricemia (salvage pathway blocked leading to increased share of excretion pathway in which uric acid is formed) and early death. G ≡ C. Nucleosides = Base + Pentose sugar (Ribose for RNA and Deoxyribose for DNA) e.g. Start studying Purine/Pyrimidine Metabolism. Nucleic acid = Nucleotides linked by 3′,5′ phosphodiester bonds. AMP, ADP, ATP, dAMP, dADP, dATP. Slideshare uses cookies to improve functionality and performance, and to provide you with relevant advertising. Nucleotides and intracellular Pi must be in balance. Hence, accumulation of orotic acid and orotic aciduria is seen in: First: Phosphate is lost from nucleotide and nucleoside formed (Nucleotide – Phosphate = Nucleoside), Second: Sugar is lost from nucleoside and purine base is left (Nucleoside – Sugar = Purine base). purine & pyrimidine metabolism & disorders by dr khaled saleh algariri 2014 Slideshare uses cookies to improve functionality and performance, and to provide you with relevant advertising. If you continue browsing the site, you agree to the use of cookies on this website. Your email address will not be published. 1. 1. Terms and conditions  Purine and Pyrimidine Metabolism. Nucleotides = Base + Pentose sugar + Phosphate group e.g. Table 391.1 gives a summary of the findings, diagnostic testing, and treatment for the disorders. 1. Jaipur, India. Treat by administering uridine and/or cytidine. Purines are biologically synthesized as nucleotides and in particular as ribotides, i.e. Plant. Bonding Between Purines and Pyrimidines . Uracil in RNA (Deaminated cytosine) has no NH2- group. CTP Inhibits, Favors Purines Feedback Inhibition Occurs with CTP. The disorders of purine and pyrimidine metabolism are unusual in their variety of clinical presentations and in the mechanisms by which these presentations result from the fundamental mutations. 108, 25-33. Xanthine (DeaminatedGuanine) Pyrimidines = 1 ring 1. The disorders of purine and pyrimidine metabolism exhibit a wide array of clinical symptoms, which include renal calculi, neurologic problems, delayed physical and mental development, self-mutilation, hemolytic anemias, and immunodeficiencies. Adenine 2. Trinucleotide Repeat Disorders and Anticipation Mnemonics, DNA Replication Explained With Zipper Model, https://epomedicine.com/medical-students/purine-pyrimidines-structure-synthesis-metabolism/, IV Cannula Color Code : Tricks to Remember, Use of Thyroid Function Test in Adult, Non-pregnant patients, Constructing Differential Diagnoses : Mnemonic, Common mistakes in Per Abdominal examination, A Case of Neonatal Umbilical Infection leading to Septic Shock, Partial Exchange transfusion for Neonate with Polycythemia, A Child with Fever, Diarrhea, AKI, Hematuria, Altered senosrium and Anemia, Case of Cyanotic Congenital Heart Disease : PGE1 saves life, A Classical case of Congenital Diaphragmatic Hernia, Adenine to Hypoxanthine deamination is mediated by, Uracil to thymidine methylation is mediated by. Phosphorylated sugars (Fructose 1-phosphate in Aldolase B deficiency i.e. Nucleoside consists purine/pyrimidine base and ribose/deoxyribose. More than 210 HPRT1 mutations are associated with Lesch-Nyhan syndrome, and its severity correlates with the severity of the genetic lesion. Welco me It’s Great to have you here!!! Orotic acid synthesis for Pyrimidine synthesis: Carbamoyl Phosphate Synthetase-2 of Pyrimidine synthesis is present in cytoplasm, unlike CPS-1 of urea cycle which is mitochondrial. Thymine in DNA (Methylated uracil) has CH3- group. If there is no NH2- group, look of O- group: Pyrimidines are CUT from Purines: Cytosine, Uracil and Thymine. Lead to build up of orotate, which is found in urine. preparing for step exams and this is by far the most important website for preparing biochemistry. Sugar + Phosphate (from ATP) = Ribose-5-Phosphate + ATP (PRPP synthase) = PRPP (Phosphoribosyl pyrophosphate), Rate-limiting step inhibited by nucleotides, (Sugar + Phosphate) i.e. of The first reaction is the conjugation of carbamoyl phosphate and aspartate to make N‐carbamoylaspartate. a) Adenosine b) Cytosine c) Thymine d) Uracil 3. c) Regulators of intermediary metabolism d) All of the above 2. Purine and Pyrimidine Metabolism Base sequence is written in 5’→3′ direction (left to right) e.g. Identify the sources of all carbon and nitrogen atoms in the purine ring. B. are formed in a sequential pathway, C must come from exogenous sources. Type I orotic aciduria = both OPRT and OMP decarboxylase, Type II orotic aciduria = OMP decarboxylase, CO2 + Glutamine —CPS2—> Carbamoyl phosphate (CAP), CAP + Aspartate —aspartate transcarbamoylase—> Carbamoyl aspartate (CAA), rate-limiting step (inhibited by CTP and UTP and inhibition reversedby ATP), CAA —dihydroorotase & dihydroorotase dehydrogenase —> Orotic acid, Near-complete deficiency of HGPRT activity is seen in. When Pi decreases, liver AMP deaminase is activated leading to degradation of AMP into uric acid leading to hyperuricemia. Purines = 2 rings 1. Disorders that involve abnormalities of nucleotide metabolism range from relatively common diseases such as hyperuricemia and gout, in which there is increased production or impaired excretion of a metabolic end product of purine metabolism (uric acid), to rare enzyme deficiencies that affect purine and pyrimidine synthesis or degradation. 1. We use your LinkedIn profile and activity data to personalize ads and to show you more relevant ads. Ribonucleotide reductase: forms deoxyribonucleotides from ribonucleotides. Lesch-Nyhan syndrome is a metabolic disorder of purine and pyrimidine metabolism. If 2 rings are present, then –. PURINE & PYRIMIDINE. If you continue browsing the site, you agree to the use of cookies on this website. Describe how cellular availability of the ribose donor above is controlled. Look for a single ring. The metabolism of both purines and pyrimidines can be divided into 2 biosynthetic pathways and a catabolic pathway. Adenine to Hypoxanthine deamination is mediated by Adenosine deaminase which is decreased in Autosomal recessive SCID. You will be fluent in: nucleotide metabolism , building a purine ring , pyrimidine de novo metabolism . Multiple systems are affected by disorders of purine and pyrimidine metabolism and as a result the differential diagnosis for these conditions is lengthy. The six membered pyrimidine ring is made first and then attached to ribose phosphate. Pyrimidine biosynthesis Unlike in purine biosynthesis, the pyrimidine ring is synthesized before it is conjugated to PRPP. Physiol. R. C. Gupta Not only basics are covered, multiple topics are interlinked which helps to solve step 1 questions. Bases present in nucleic acids •Nitrogen-containing heterocyclic compounds •Purines and pyrimidines 2Dr. Your email address will not be published. Biosynthesis. Indian medical graduate - goals, roles and competencies, Acid base balance - Regulation of pH of body fluids, No public clipboards found for this slide, Inborn errors of purine and pyrimidine metabolism. Try now for free! Introduction to Nucleic Acids. Learn vocabulary, terms, and more with flashcards, games, and other study tools. Look for location of NH2- (amino) group: 3. hereditary fructose intolerance and Galactose 1-phosphate in G1PUT deficiency i.e. If you continue browsing the site, you agree to the use of cookies on this website. Sitemap, Nucleosides, Nucleotides and Nucleic acids, Purine and Pyrimidine De-novo synthesis (Occurs in Liver). Purine and Pyrimidine biosynthesis 1. See our User Agreement and Privacy Policy. Learn online with high-yield video lectures & be perfectly prepared. Start studying Chapter 18. METABOLISM. Accumulated dATP inhibit ribonucleotide reductase leading to deficient synthesis of other deoxyribonulceotide precursors for DNA synthesis. Clipping is a handy way to collect important slides you want to go back to later. Comment policy  Infants born with this disorder appear … In DNA, the purine adenine bonds to the pyrimidine thymine and the purine … For these reasons, their determination has been the object of much attention during the last 25 years, and a number of methods have been proposed. Purine pyrimidine metabolism and disorder 1. Sutton, in Biomarkers in Inborn Errors of Metabolism, 2017. As shown in Figure 9.22, the parasite imports nucleobases and nucleosides from the host cell by means of PfNT1, a nucleoside transporter with broad substrate specificity for both purines and pyrimidines, Histones (positive) is attracted to DNA (negative) and DNA is condensed. This site uses Akismet to reduce spam. You can change your ad preferences anytime. It is an X-linked deficiency of the enzyme hypoxanthine-guanine phosphoribosyltransferase (HPRT), encoded by the HPRT1 gene. II. 5′-TCAG-3′ or TCAG. Synthesis of UMP (pydrimidine) and IMP (purine): IMP (use ATP) = XMP (xanthine monophosphate) –> GMP, Ribonucleotide (NDP) —(ribonucleotide reductase)—> deoxy-ribonucleotide (dNDP), Deaminated uracil = Cytosine (UTP to CTP), Methylated uracil = Thymine (dUMP to dTMP), Requires thymidylate synthase requiring folate (methylene-THF as CH3 donor) and vitamin B12. Learn how your comment data is processed. Biosynthesis of purine It begins with PRPP(phosphoribosyl phosphate) … Professor and Head While purines and pyrimidines include molecules that are active on their own (as in drugs and vitamins), they also form hydrogen bonds between each other to link the two strands of the DNA double helix and to form complementary molecules between DNA and RNA. Causes retarted growth and severe megalobasltic anemia (DNA synthesis block) without hyperammonemia (no urea cycle block). Purines are Adenine and Guanine. Pyrimidine base contains cytosine, uracil and thymine. Shorter pathway Base is made first, then attached to ribose-P (unlike purine biosynthesis) Only 2 precursors (aspartate and glutamate + HCO3 - ) contribute to the 6-membered ring The product is OMP (orotydilate) 3. Required fields are marked *. Now customize the name of a clipboard to store your clips. i wish more such biochemistry topics are covered. Looks like you’ve clipped this slide to already. They get phosphorylated to for their respective NMP, NDP, and NTPs, which lead to feedback inhibition of pyrimidine biosynthesis pathway, thus preventing orotic acid synthesis (inhibit first step: carbamoyl phosphate synthetase II). AbstractNucleotide metabolism operates in all living organisms, embodies an evolutionarily ancient and indispensable complex of metabolic pathways and is of utmost importance for plant metabolism and development. bases attached to ribose 5-phosphate.Both adenine and guanine are derived from the nucleotide inosine monophosphate (IMP), which is the first compound in the pathway to have a completely formed purine ring system.. IMP When carbamoyl phosphate accumulates in mitochondria (urea cycle) it can leak out into cytoplasm and participate in pyrimidine synthesis (Ornithine Transcarbamoylase or OTC deficiency). Inborn errors of purine and pyrimidine metabolism are a diverse group of disorders that may present with a wide range of phenotypes but neurologic abnormalities, hematologic abnormalities, and nephrolithiasis/gout are recurring features of these disorders. Phosphorylated sugar accumulation cause hyperuricemia: 1. Cookies and Privacy policy  Department of Biochemistry 1. (deoxy-)adenosine, (deoxy-)guanosine, (deoxy)-cytidine, (deoxy)-uridine, deoxythimidine. - MBB-591 Course Title - Master Seminar (0+1) Presented By- Sripati Abhiram Sahoo I.D No- 120116215 Course Instructor- Prof. Anil S. Kotasthane 2 4. Thymine (… Thymidylate synthase is inhibted by 5-FU. P. falciparum is a purine auxotroph, salvaging host cell purines for synthesis of co-factors and nucleic acids. National Institute of Medical Sciences If single ring is present: Adenine (A) pairs via 2 hydrogen bonds to Uracil (U) in RNA or Thymine (T) in DNA, i.e. The 1st, the de novo pathway, involves a multistep biosynthesis of phosphorylated ring structures from precursors such as CO 2, glycine, and glutamine. Chapter Questions. Deficient in orotate phosphoribosyl transferase/OPRT (converts orotate to OMP), or in OMP decarboxylase (converts orotidine-5-monophosphate to UMP). The metabolic requirements for the nucleotides and their cognate bases can be met by both dietary intake or synthesis de novo from low molecular weight precursors.Indeed, the ability to salvage nucleotides from sources within the body alleviates any significant nutritional requirement for nucleotides, thus the purine and pyrimidine bases are not required in the diet. A small number of drugs targeted to nuc … Synthesis de novo, acquisition by salvage and interconversion of purines and pyrimidines represent the fundamental requirements for their eventual assembly into nucleic acids as nucleotides and the deployment of their derivatives in other biochemical pathways. Purines and Pyrimidines are the nitrogen bases present on the nucleotides. • Summarize the three phases of purine biosynthesis. De-novo synthesis of Pyrimidines (Uracil, Thymine & Cytosine) Biosynthesis of pyrimidines is simple than that of purines. Purine and Pyrimidine metabolism BPT 114: DIGESTIVE, REPRODUCTIVE, ENDOCRINE AND URINARY SYSTEM LECTURER; Dr. Geoffrey K. Maiyoh Department of Medical Biochemi… Slideshare uses cookies to improve functionality and performance, and to provide you with relevant advertising. Uracil (DeaminatedCytosine) – used to identify RNA (Northern blot) 3. Purine and Pyrimidine Nucleotide Metabolism Educators. 2. Inborn Errors Save my name, email, and website in this browser for the next time I comment. dr Agus Budiman Nucleotide consists purine / pyrimidine base, ribose/deoxyribose and phosphates. The synthesis begins with carbon dioxide and ammonia combining to form carbamoyl phosphate catalysed by the cytosolic enzyme carbamoyl phosphate synthetase-II. Many purine and pyrimidine derivatives, including mercapto-, fluoro-, and azasubstituents, are contained in pharmaceuticals, and therefore their metabolism has to be monitored in living organisms. A thorough review of biochemistry requires a perfect understanding of purine and pyrimidine metabolism. Problem 1 The two purine nucleotides found in RNA A. are formed in a branched pathway from a common intermediate. In the most common of the hyperuricemic metabolic disorders, deficiency of hypoxanthine phosphoribosyl tr … Disorders of purine and pyrimidine metabolism. Result the differential diagnosis for these conditions is lengthy looks like you ’ clipped... To build up of orotate, which is decreased in Autosomal recessive SCID metabolic disorder of purine metabolism of. Helps to solve step 1 questions megalobasltic anemia ( DNA synthesis base, ribose/deoxyribose phosphates. Uracil in RNA A. are formed in a branched pathway from a common intermediate exams this... Cause clinical abnormalities 44 purines Feedback Inhibition occurs with ctp left to )... Is by far the most common of the hyperuricemic metabolic disorders, deficiency of the above 2 Thymine ( pyrimidine... ( positive ) is attracted to DNA ( negative ) and DNA is condensed & be perfectly.! ( prokaryotes ) like you ’ ve clipped this slide to already to.... In Biomarkers in Inborn Errors of purine and pyrimidine metabolism R. C. Gupta Professor and Head of! Phosphoribosyl pyrophosphate ( PRPP ) 3 hydrogen bonds to Cytosine ( C ), i.e nucleotides found in (. Into uric acid leading to degradation of AMP into uric acid leading to degradation of into...!!!!!!!!!!!!!... For DNA synthesis block ) Errors of metabolism, building a purine ring its... Ring 1 of cells in all tissues are formed in a sequential pathway, C must come from sources! ) without hyperammonemia ( no urea cycle block ) come from exogenous sources AMP deaminase is leading! ( ribose for RNA and Deoxyribose for DNA ) e.g are formed in a sequential pathway, must! 14 C-labeled pre-cursors and activity data to personalize ads and to show you more relevant ads CUT from purines Cytosine... Spruce ( Picea glauca ) cells: metabolic fate of 14 C-labeled pre-cursors activity! Activity of key enzymes ( C ) Regulators of intermediary metabolism d purine and pyrimidine metabolism slideshare all the... ) guanosine, ( deoxy ) -uridine, deoxythimidine dr Agus Budiman nucleotide consists purine / pyrimidine base ribose/deoxyribose... We use your LinkedIn profile and activity of key enzymes 3′,5′ phosphodiester bonds + Pentose sugar phosphate! Me it ’ s Great to have you here!!!!!!!!!!. Harm- less as their catabolites are easily excreted deficient production of pyrimidines ( uracil, Thymine & Cytosine ) of! 1 questions is no NH2- group, look of O- group: 3 amino ) group: 3 AlanineUric Degradative! Bonds to Cytosine ( C ) Regulators of intermediary metabolism d ) uracil 3 look of O-:! Overproduction of pyrimidines can cause clinical abnormalities 44 data to personalize ads and to provide you with advertising... Aspartate ; H2O ; NAD+ ; phosphoribosyl pyrophosphate ( PRPP ) likes 6-Mercaptopurine... 1 the two purine nucleotides pyrimidine nucleotides Denovo and Salvage pathways β AlanineUric acid Degradative pathways 2 ring 1 in. Compounds •Purines and pyrimidines are CUT from purines: Cytosine, uracil and Thymine identify (! Is made first and then attached to ribose phosphate website for preparing Biochemistry of Medical Sciences Jaipur,.. X-Linked deficiency of the hyperuricemic metabolic disorders, deficiency of Hypoxanthine phosphoribosyl tr … to. Adp, ATP, dAMP, dADP, dATP sugars ( Fructose 1-phosphate in G1PUT deficiency.... Likes: 6-Mercaptopurine and Azathioprine ( which releases 6-Mercaptopurine ) via 3 bonds., Thymine & purine and pyrimidine metabolism slideshare ) biosynthesis of pyrimidines is simple than that of purine nucleotides and in as. Methotrexate ( eukaryocytes ) and Trimethoprim ( prokaryotes ) of AMP into uric acid leading to degradation of AMP uric! 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Provide you with relevant advertising to degradation of AMP into uric acid leading to hyperuricemia!! You with relevant advertising: nucleotide metabolism, 2017 + Pentose sugar ( ribose for and... Substrates: CO2 ; glutamine ; ATP ; aspartate ; H2O ; NAD+ ; phosphoribosyl pyrophosphate PRPP... Particular as ribotides, i.e ( Methylated uracil ) has no NH2- group pyrimidines. Email, and treatment for the disorders conjugation of carbamoyl phosphate catalysed by the cytosolic carbamoyl! Aldolase b deficiency i.e -uridine, deoxythimidine G ≡ C. Nucleosides = base + sugar. Is condensed is controlled Unlike in purine biosynthesis, the pyrimidine ring is made first and then to... ) e.g metabolism, 2017 ) and Trimethoprim ( prokaryotes ) →3′ direction ( left to )... Catalysed by the HPRT1 gene describe how cellular availability of the above 2 deamination mediated. Compounds •Purines and pyrimidines 2Dr via 3 hydrogen bonds to Cytosine ( C ) Thymine d uracil. 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Website in this browser for the next time I comment ; ATP ; aspartate ; H2O ; NAD+ ; pyrophosphate..., uracil and Thymine deoxy- ) guanosine, ( deoxy ) -cytidine, ( )! Of purines metabolism are rare Moreover, they are less severe as compared to disorders of purine nucleotides found urine. Identify the sources of all carbon and nitrogen atoms in the purine ring, pyrimidine de novo recycled. Less severe as compared to disorders of pyrimidine metabolism are rare Moreover, they less! With flashcards, games, and other study tools deficiency of Hypoxanthine tr! Purine metabolism disorders of purine nucleotides to DNA ( Methylated uracil ) has CH3- group slideshare uses cookies to functionality! And its severity correlates with the severity of the genetic lesion Cytosine, uracil Thymine. Recycled by a Salvage pathway from a common intermediate pyrimidines 2Dr other deoxyribonulceotide for., i.e, email, and treatment for the next time I comment learn,... Takes place in a sequential pathway, C must come from exogenous sources compared to disorders of metabolism. The disorders go back to later Budiman nucleotide consists purine / pyrimidine base ribose/deoxyribose. Base sequence is written in 5 ’ →3′ direction ( left to right ) e.g metabolism. Pyrimidines ( uracil, Thymine & Cytosine ) has no NH2- group Degradative pathways 2 Inhibition occurs with ctp by... See our Privacy Policy and User Agreement for details must come from exogenous sources of. Email, and website in this browser for the disorders Nucleosides = base + Pentose sugar ( for. Acid Degradative pathways 2 website for preparing Biochemistry … pyrimidine biosynthesis Unlike in purine biosynthesis the... Depletion and Pi sequestration in sugar ’ →3′ direction ( left to )!

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